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Notes from the Field

I have been working with a project focused on drought in Kenya for months using NASA satellite data and was excited to get a ground-based perspective of the country and meet fellow Earth Scientists in Nairobi, Kenya. My colleague Eric Anderson and I attended a week long course on the Quality Index Insurance Certification (also known as QUIIC), which provides methods to evaluate the quality of satellite-based indices for use in agriculture/pastoralist insurance.

The left image shows average NDVI over Kenya while the right image shows average NDVI during the 2011 drought period.

I’ve been working with SERVIR since November 2018 to support the development of a lower-latency vegetation index, inspired by Kenya Livestock Insurance Program needs. A lower-latency product can enable programs like these to provide relief sooner, potentially before total losses. The Normalized Difference Vegetation Index (NDVI) is currently used in this insurance program and provides a satellite-based measure of vegetation health, which can show how much forage is available for livestock consumption. When conditions are bad, the program is intended to help people through the season without experiencing devastating losses. 

Indices, such as vegetation health, can be monitored using satellites and provide a low cost way to detect things like drought, especially where field data is scarce and pastoralists may otherwise be uninsurable under traditional contracts. Index insurance programs are meant to promote farmer and pastoralist resilience, but if they are designed poorly they can actually leave people worse off. For example, if conditions are bad one year but the index fails to trigger payouts, farmers would be worse off had they purchased insurance and not received a payout. The information-rich course, led by economics experts from UC Davis (Michael Carter and Elinor Belami), helped us understand a different side of applying remote sensing to real world problems. We learned about the economics of insurance and evaluated the quality of using different indices compared to traditional insurance for a focus region.

Here we are on the first day of the course playing a game to explain risk aversion. People who are more risk averse choose an option that has lower risk, even though the choice may have a lower average reward.

It was a great experience to be able to see a different culture and meet so many people from different backgrounds. Our next mission is to bring what we learned in the course back to the SERVIR hubs and explore ways to apply it. Using methods to measure quality of an insurance index we can decide if index based insurance is appropriate for different regions.

The course brought together representatives from UC Davis, SERVIR hubs and the Regional 
Centre for Mapping of Resources for Development (RCMRD).



Trail Breaking Grand Mesa

December 19th, 2018 by Christopher Hiemstra and Ludovic Brucker

Colorado’s Grand Mesa as viewed from a commercial airline flight departing Grand Junction, 5 December 2018.


Ground validation measurements are an important part of working with remote sensing instruments like SWESARR. Snow is dynamic and changes occur as soon as it settles to Earth’s surface. In a dry, windy place like Colorado’s Grand Mesa, snow can move around, be packed into drifts, get intercepted in canopy, sublimate back into the atmosphere, and metamorphose into depth hoar as winter progresses.

Fresh snow blankets Grand Mesa’s trees and ground during an early-season snow measurement campaign.  In the week before we arrived, there was 40-70 cm of new snow.


Ludo Brucker (NASA GSFC / Universities Space Research Association) and Chris Hiemstra (Cold Regions Research and Engineering Laboratory) were on Grand Mesa preparing for NASA SnowEx 2019. During the latter half of November 2018, Grand Mesa was blanketed in 40-70 cm (about 15-27 inches) of new snow from a series of storms. Fortunately, a short break in the weather with clear skies was forecast for the last SWESARR engineering flight. Optimistic plans to take early season measurements on Grand Mesa materialized.

Mike Renner, Grand Mesa Lodge, groomed Grand Mesa’s snowmobile trails for the first time late into the previous evening, which aided our one-day measurement campaign visiting radar corner reflectors used for SWESARR assessment and making measurements under the flight lines.


The only problem was that the flight lines were well out into the west end of Grand Mesa and the early season snow was new and deep. Chances of getting stuck on the way out there were high, especially as the route went uphill from Grand Mesa Lodge perched on the south side of Crag Crest. Fortunately, Grand Mesa Lodge owner Mike Renner grooms Grand Mesa snowmobile trails throughout the winter season and he groomed a route out to the west side of the Mesa the previous evening. On the morning of December 4, Ludo and Chris rode 11 miles to the west end of the Mesa.

A radar corner reflector on Grand Mesa was cleaned for the flight.  Reflectors are used to return strong radar signals back to the aircraft.


Just as they arrived in the blazing sun, the drone of the Twin Otter carrying SWESARR and flying one of the lines could be heard. They cleaned out the radar reflectors, then set about collecting snow data. The corner reflectors are used to assess the airborne radar observations.

Ludo measured snow density and temperature, as well as snow stratigraphy and grain size information.

This early in the season, snow under the tree canopy is markedly lower than elsewhere on the Mesa.  Not much movement of snow occurs early in the season as long as vegetation holds it.  Much of the snow here remains in the canopy above, which will drop, melt, and sublimate over coming weeks.

Chris used a magnaprobe, an automated snow depth measurement device that records snow depth and GPS-location into a backpack mounted datalogger.


In all, five snow pits were performed and over 1500 snow depths were measured at various points along several pre-determined flight lines.

Colorado’s Grand Mesa is a high elevation surface covered in shrubland, meadows, and trees. Three SWESARR flight lines were distributed over the Mesa and ground observations and travel are indicated. Trees (inset) have a pronounced impact on snow depths, with snow depths low directly under the canopy and much higher adjacent to tree canopy.


After a week of snowfall, welcome clear and calm conditions resulted in an outstanding day collecting ground-truth data useful for assessing instruments and algorithms for the early-season snowpack.

Snow, wind, trees, and topography interact to determine snow depths on Grand Mesa. Fog rolls onto the west end of the Mesa.

NAAMES-IV Expedition: April 4, 2018

April 4th, 2018 by Kristina Mojica

Never Boring

“Wow, what an exciting life you lead” is a seemingly cliché response I get when the topic of what I do for a living comes up in casual conversation with strangers.  I know for a fact (from having to clarify enough times, as I’m sure everyone aboard has also) that those people envision a cruise departing from Puerto Rico to entail some sort of warm, tropical, Steve Zissou-esque adventure, a life of freedom upon the open ocean, studying the dolphins that happen to swim by, sipping cocktails after work, visiting exotic countries, basically anything just short of playing shuffleboard up on the lido deck, because, you know, it is a job after all.  If you’ve been following this blog, you’ve already gotten a hearty sense that those kind of Instagrammable moments, drinking coffee and watching the sunrise, is punctuated by the other 23 hours and 55 minutes a day of exhausting, dedicated work to the science mission.

Expected versus the reality of a research cruise

The other morning I found myself chatting in the lab with Ben and Kay, wondering what to write about.  A prompt of “what do you do all day?” led to explaining there is really one goal I am setting myself out to achieve on any given day, week, or cruise.  And I’m still waiting, nearly 10 years later, to really achieve it.  The one goal I thought I almost had within my grasp on a few occasions, but the sea and the universe undoubtedly found a way to thwart in some way or another.  Boredom.  What?  Who has that goal?  Who wants to have a boring job?  What’s wrong with this girl, is she crazy?  But to me, it means nothing is broken that I have to figure out a way to fix in the middle of the ocean.  It means a full night’s sleep with no unexpected wake up calls.  It means I don’t have to hang on for dear life to avoid getting tossed out of the shower in the morning.  It means I know what I am going to work on that day and have no reason it won’t be done by the end of the day.  In the last week alone, I’ve woken up each morning thinking I’m in for just another day with my favorite NAAMES crew.  And then while recovering the optics instruments I end up wetter than when I stepped out of the shower a few hours before.  And then there’s been a shift so we decide to drop what we’re doing and take off for the next station.  And then a false alarm goes off in the fire system.  And then there’s a major equipment failure that leaves us drumming up every ounce of creativity on how we are going to accomplish the rest of the scientific mission.  And then 50 knot winds kick up, throwing everything on the ship, literally and figuratively, for a loop.  Are you beginning to see where I’m coming from when I say I could really stand to have a boring day once in a while? (It’s my ½ birthday today, maybe today will be my lucky day? Hi Mom! Hi Dad! Happy Anniversary! I digress…).

The best laid plans, thrown for a loop

As much as I kid about longing for an Office Space-like existence where my biggest worries are the TPS reports I might have to come in on Saturday to finish (I come in every Saturday, it’s not optional) and a printer that perpetually displays “PC Load Letter” (I already have one onboard that says that), being present and contributing to some of the most inspired research around is a truly humbling experience that I can’t believe I’m lucky enough to be afforded.  Even more than the research that might one day make the news (I confess, it is beyond sweet to be able to point to an article and say “I was there, I did that!), it is the everyday conversations and discoveries that pique my curiosity and un-bore-ify (I make up words, it’s a hobby) my life at sea the most.  The people and the instrumentation that NAAMES brings together ensures a never-ending dose of the kind of excitement that I don’t mind coming along in an atmosphere where you can’t help but get caught up in it.  In the same past week I described above, the aerosol teams detected some of the cleanest air on earth, where of all things, I’m most amused by the fact that the air is too clean to have my hot coffee produce any steam when I walk outside.  During humdrum CTD cast #9 of this cruise, we profiled nearly 65 degree Fahrenheit water mixed down to a depth of 600m…in the North Atlantic…in winter.  I’ve literally seen thousands of CTD casts in my life, and I’ve seriously never seen anything like that.  And those 50+ knot winds we saw a couple times this week?  I’m from California where any deviation from sunny and 75 degrees makes headline news, so it’s really in the lousiest of weather that I’m always the first person outside watching the show.

The struggle is real

This -something new around every corner- is the nature of the sea-going business.  No one can possibly predict what the final week of NAAMES will bring to the Atlantis, the scientists, and the crew aboard.  No telling what papers might come out of the research or what new questions or projects will be spawned, or what “remember when” stories the crew will still be telling about NAAMES in the years to come, but I’m pretty sure no one will tell you coming out here to study the North Atlantic was boring.

Written by Catie Graver (SSSG Technician)

NAAMES-IV Expedition: March 31, 2018

April 2nd, 2018 by Kristina Mojica

At Sea

This is the second of the NAAMES cruises that I have been able to sail. The first was NAAMES #1, November, 2015, and I am lucky to be on this, the last of four cruises that were scheduled for this campaign. Having bookended these cruises, I recognize a couple of changes in both the NAAMES team and myself that have occurred over the course of the campaign.

The NAAMES team: The Chief Scientist and Principal Investigator of this mission, Mike Behrenfeld, built a team of scientists to answer questions about the North Atlantic Bloom and its atmospheric impacts. Many of the team members were unknown to each other at the start of this campaign because they came to NAAMES from disparate disciplines: biological, chemical, and physical oceanography, microbiology, virology, atmospheric chemistry, atmospheric physics, and ecosystem modeling. Annual team meetings encouraged healthy cross-talk. After four cruises and three team meetings, there is comradery built by hard work, innovation, and curiosity. There is respect for the variety of scientific approaches and expertise. This team functions smoothly on the R/V Atlantis. And, perhaps most importantly, shared purpose has gathered momentum leading to new and unexpected contributions to ecosystem science. This team embraces hard work and laughs easily in the labs, on deck, in the galley, and even during daily science briefings. Earlier hesitations have given way to relaxed dialogue and fresh ideas.

I was full of nerves during NAAMES #1. Worried about our instrumentation (i.e., would the turbo pumps survive the incessant bouncing of the ship?, Would the flow controllers function?, Would the automated valves switch properly?). I worried about getting seasick. Worried about the medication to prevent seasickness. Worried about the General Microbiology class I left midterm in the hands of a colleague. Worried about the myriad of “things that need to be done at home.” …..Fast forward….By NAAMES #4, I have developed confidence in the instrumentation (and Cleo Davie-Martin, who is the PTR-MS conductor-extraordinaire). New experiments have been added with each campaign. Turns out, seasickness medication was unnecessary. I am blissfully aware that the internet is too slow to catch up on the news. The sunrise is a priority, even while working*.

*Incubations begin and end at dawn, my favorite time of day.

Leaving worrying behind allows for a certain kind of freedom at sea. Contemplation becomes less constrained. Time allows thoughts to forge new paths through unexplored jungles dotted with boulders to leap and bridge to new ideas. Once in a while these thought-explorations lead to a clearing where I mentally stack stones into a duck or blaze the bark of a tree so that the idea can be revisited and won’t be lost in the weeds. What a spectacular treat to let these thoughts bound along without the daily distractions that I apparently allow to seep in and prevent freedom of exploration. At sea, exploration of ideas is less encumbered by rules of engagement. Perhaps the rarest of scientists are always “at sea,” never dithering with boundaries and are instead free to meander across scales, dimensions, and disciplines, eventually emerging with unexpected and shattering ideas.

For non-sailors, to be “at sea” usually implies confusion or disorientation. As in, “She was at sea with String Theory.” On the contrary, my definition of “at sea” as of NAAMES #4 has evolved to mean freedom of exploration.

Luis Bolaños (Oregon State University, expert in microbial genomics and bioinformatics) at the rail. Where are his thoughts taking him at sea?

Written by Kim Halsey

NAAMES-IV Expedition: March 30, 2018

April 2nd, 2018 by Kristina Mojica

A New Adventure

Another beautiful sunset in the North Atlantic.

NAAMES #4 is my first long-term ocean-going research cruise. The anticipation built as I prepared to leave my husband and Paisley, my golden retriever, at home for an entire month. Did I pack everything that I need? Would the food be good? Would I enjoy the experience? Yes, yes and yes!

Not only have a learned a lot from the other scientists around me, but I have enjoyed the experience and built new friendships along the way. There are now only 10 days left at sea, and I can say with confidence that I am happy that I have participated in the NAAMES campaign.

A rainbow in the waves of the North Atlantic.

Not only was the field-work a new experience for me, but the research was as well. Coming from a microbiology background, atmospheric science and the study of aerosols was completely new to me as I started this journey. However, I was excited and anxious to learn something new. The collaboration among biologists and aerosol scientists has been rewarding as we are all here for the same goal, to learn more about the North Atlantic phytoplankton bloom.

Written by Alyssa Alsante